Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Trav12d-1A0N8R0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Gm8749-201ENSMUST00000117737 331 ntBASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Gm33142-201ENSMUST00000193913 867 ntBASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 AC126250.1-201ENSMUST00000228343 1768 ntBASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav12d-1A0N8R0 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Gm15593-201ENSMUST00000122085 1008 ntBASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Gm7787-201ENSMUST00000216858 688 ntBASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 AC159301.1-201ENSMUST00000225130 1182 ntBASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 AC130669.1-201ENSMUST00000228537 1672 ntBASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav12d-1A0N8R0 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Gm9726-201ENSMUST00000180321 678 ntBASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav12d-1A0N8R0 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms