Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm27494-201ENSMUST00000184735 189 ntBASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Tspyl-ps-201ENSMUST00000220692 1117 ntBASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Chchd1-203ENSMUST00000224633 557 ntBASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Tbc1d2-202ENSMUST00000107750 1941 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Lck-202ENSMUST00000102596 2111 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm6226-201ENSMUST00000117765 1146 ntBASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gm11025-201ENSMUST00000140773 466 ntBASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC10.65□□□□□ -0.7
Trav13n-1A0A0G2JEU8 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC10.65□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Efcab14-204ENSMUST00000106525 2792 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC10.65□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Nrn1-204ENSMUST00000224323 1779 ntBASIC10.65□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC10.65□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gyg-203ENSMUST00000178328 1698 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm14701-201ENSMUST00000117156 348 ntBASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm12892-201ENSMUST00000117367 1146 ntBASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
Trav13n-1A0A0G2JEU8 AC025913.2-201ENSMUST00000220136 1766 ntBASIC10.64□□□□□ -0.71
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms