Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm30238-201ENSMUST00000195528 2603 ntBASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm8784-201ENSMUST00000222096 1435 ntBASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm14722-201ENSMUST00000118943 689 ntBASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm25406-201ENSMUST00000157599 105 ntBASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 AC153881.2-201ENSMUST00000214877 204 ntBASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Arhgap33-207ENSMUST00000208538 4372 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.13□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Fars2-205ENSMUST00000224241 1665 ntAPPRIS P1 BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 A330040F15Rik-202ENSMUST00000224046 1918 ntBASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm13312-201ENSMUST00000119631 718 ntBASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm25016-201ENSMUST00000158399 131 ntBASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.12□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm12008-201ENSMUST00000117791 755 ntBASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm15565-201ENSMUST00000118890 427 ntBASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Rprl3-201ENSMUST00000157400 290 ntBASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC11.11□□□□□ -0.63
Trav3n-3A0A0G2JEM0 Gm9172-201ENSMUST00000212092 954 ntBASIC11.11□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms