Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm12008-201ENSMUST00000117791 755 ntBASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 AC084391.1-201ENSMUST00000200651 141 ntBASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 AC154222.1-201ENSMUST00000223882 475 ntBASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Trav9n-2A0A0G2JDP3 Csnk1g1-212ENSMUST00000206048 2073 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms