Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav6d-5A0A075B6B9 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav6d-5A0A075B6B9 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav6d-5A0A075B6B9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav6d-5A0A075B6B9 Gm5184-201ENSMUST00000220417 1702 ntBASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Cybrd1-201ENSMUST00000028403 5339 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm8749-201ENSMUST00000117737 331 ntBASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm18489-201ENSMUST00000172565 551 ntBASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm9726-201ENSMUST00000180321 678 ntBASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm27646-201ENSMUST00000183989 110 ntBASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm45630-201ENSMUST00000210243 1911 ntBASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm6198-201ENSMUST00000191337 2929 ntBASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm14042-201ENSMUST00000120139 833 ntBASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm15372-201ENSMUST00000120729 834 ntBASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm27742-201ENSMUST00000184667 60 ntBASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav6d-5A0A075B6B9 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms