Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav17A0A075B655 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav17A0A075B655 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Trav17A0A075B655 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Trav17A0A075B655 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Trav17A0A075B655 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.66□□□□□ -0.54
Trav17A0A075B655 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav17A0A075B655 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 AC166574.6-201ENSMUST00000227889 1806 ntBASIC11.66□□□□□ -0.54
Trav17A0A075B655 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Gm27646-201ENSMUST00000183989 110 ntBASIC11.66□□□□□ -0.54
Trav17A0A075B655 AC153889.1-201ENSMUST00000219257 330 ntBASIC11.66□□□□□ -0.54
Trav17A0A075B655 AC124569.2-201ENSMUST00000225998 818 ntBASIC11.66□□□□□ -0.54
Trav17A0A075B655 AC121577.1-201ENSMUST00000227302 707 ntBASIC11.66□□□□□ -0.54
Trav17A0A075B655 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav17A0A075B655 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Fbxw2-205ENSMUST00000113078 1872 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Trav17A0A075B655 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Trav17A0A075B655 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav17A0A075B655 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC11.65□□□□□ -0.55
Trav17A0A075B655 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Trav17A0A075B655 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav17A0A075B655 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav17A0A075B655 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav17A0A075B655 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.55
Trav17A0A075B655 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav17A0A075B655 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Trav17A0A075B655 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms