Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 CT010506.4-201ENSMUST00000225457 351 ntBASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm44291-201ENSMUST00000203102 2865 ntBASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm2308-201ENSMUST00000166539 1004 ntBASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm13830-205ENSMUST00000201195 1155 ntBASIC12.47□□□□□ -0.41
Trav15d-1-dv6d-1A0A075B624 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms