Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm26513-201ENSMUST00000181802 2489 ntBASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm13436-201ENSMUST00000120418 567 ntBASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm20478-201ENSMUST00000173648 1031 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm18101-201ENSMUST00000215769 548 ntBASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm21559-201ENSMUST00000220638 855 ntBASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 CT009510.1-201ENSMUST00000227972 270 ntBASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm8587-201ENSMUST00000076538 843 ntBASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm10313-201ENSMUST00000095320 1002 ntBASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC10.79□□□□□ -0.68
Trav16d-dv11A0A075B617 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm11860-201ENSMUST00000122346 1010 ntBASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Krtap5-1-202ENSMUST00000188274 742 ntBASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm45058-201ENSMUST00000205810 766 ntBASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm9172-201ENSMUST00000212092 954 ntBASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.78□□□□□ -0.68
Trav16d-dv11A0A075B617 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.77□□□□□ -0.68
Trav16d-dv11A0A075B617 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.68
Trav16d-dv11A0A075B617 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav16d-dv11A0A075B617 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav16d-dv11A0A075B617 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav16d-dv11A0A075B617 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav16d-dv11A0A075B617 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav16d-dv11A0A075B617 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav16d-dv11A0A075B617 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav16d-dv11A0A075B617 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav16d-dv11A0A075B617 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.68
Trav16d-dv11A0A075B617 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
Trav16d-dv11A0A075B617 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC10.77□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms