Protein–RNA interactions for Protein: A0A075B601

Trav9-1, T cell receptor alpha variable 9-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-1A0A075B601 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Gm23547-201ENSMUST00000158210 271 ntBASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Gm5864-201ENSMUST00000202263 970 ntBASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 CT010506.4-201ENSMUST00000225457 351 ntBASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trav9-1A0A075B601 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Gm11764-201ENSMUST00000120221 623 ntBASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
Trav9-1A0A075B601 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trav9-1A0A075B601 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Mir8098-201ENSMUST00000184011 137 ntBASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Gm10060-201ENSMUST00000212002 111 ntBASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
Trav9-1A0A075B601 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 56.2 ms