Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav5-1A0A075B5Z7 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 AC148324.1-201ENSMUST00000219034 4240 ntBASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Tcf21-202ENSMUST00000218002 1788 ntBASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm8410-201ENSMUST00000117225 605 ntBASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 AC159114.1-201ENSMUST00000220349 266 ntBASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav5-1A0A075B5Z7 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC12.58□□□□□ -0.39
Trav5-1A0A075B5Z7 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav5-1A0A075B5Z7 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Trav5-1A0A075B5Z7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm6415-201ENSMUST00000118488 348 ntBASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm25144-201ENSMUST00000179561 110 ntBASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm25352-201ENSMUST00000179815 110 ntBASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav5-1A0A075B5Z7 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm5421-201ENSMUST00000181698 2354 ntBASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 AA543401-201ENSMUST00000164248 1269 ntBASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav5-1A0A075B5Z7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms