Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Spr-ps1-201ENSMUST00000089584 605 ntBASIC11.45□□□□□ -0.58
CcsQ9WU84 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC11.45□□□□□ -0.58
CcsQ9WU84 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
CcsQ9WU84 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC11.45□□□□□ -0.58
CcsQ9WU84 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CcsQ9WU84 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.44□□□□□ -0.58
CcsQ9WU84 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CcsQ9WU84 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC11.44□□□□□ -0.58
CcsQ9WU84 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Gm12895-201ENSMUST00000122214 226 ntBASIC11.44□□□□□ -0.58
CcsQ9WU84 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CcsQ9WU84 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC11.44□□□□□ -0.58
CcsQ9WU84 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC11.44□□□□□ -0.58
CcsQ9WU84 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.44□□□□□ -0.58
CcsQ9WU84 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 AC162938.1-201ENSMUST00000213140 2323 ntBASIC11.44□□□□□ -0.58
CcsQ9WU84 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC11.44□□□□□ -0.58
CcsQ9WU84 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Gm15442-201ENSMUST00000117905 1527 ntBASIC11.44□□□□□ -0.58
CcsQ9WU84 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.44□□□□□ -0.58
CcsQ9WU84 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Fgf15-201ENSMUST00000033389 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC11.44□□□□□ -0.58
CcsQ9WU84 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Pld2-202ENSMUST00000108556 3391 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC11.44□□□□□ -0.58
CcsQ9WU84 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.43□□□□□ -0.58
CcsQ9WU84 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC11.43□□□□□ -0.58
CcsQ9WU84 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CcsQ9WU84 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 AC153794.1-201ENSMUST00000169148 126 ntBASIC11.43□□□□□ -0.58
CcsQ9WU84 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC11.43□□□□□ -0.58
CcsQ9WU84 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.43□□□□□ -0.58
CcsQ9WU84 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.43□□□□□ -0.58
CcsQ9WU84 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.43□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms