Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Gm24694-201ENSMUST00000180054 110 ntBASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Gm27663-201ENSMUST00000184839 110 ntBASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Gm5421-201ENSMUST00000181698 2354 ntBASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Gm4875-201ENSMUST00000118257 786 ntBASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Gm14057-201ENSMUST00000120631 482 ntBASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Gm43598-201ENSMUST00000202482 2479 ntBASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Scn8aQ9WTU3 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Gm45667-201ENSMUST00000210380 1316 ntBASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Scn8aQ9WTU3 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Gm7730-201ENSMUST00000212486 454 ntBASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Gm5626-201ENSMUST00000222151 1058 ntBASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Gm9229-201ENSMUST00000222777 126 ntBASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.67□□□□□ -0.06
Scn8aQ9WTU3 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms