Protein–RNA interactions for Protein: Q9R061

Nubp2, Cytosolic Fe-S cluster assembly factor NUBP2, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp2Q9R061 Gm6736-201ENSMUST00000166583 948 ntBASIC13.07□□□□□ -0.32
Nubp2Q9R061 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nubp2Q9R061 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nubp2Q9R061 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.06□□□□□ -0.32
Nubp2Q9R061 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.06□□□□□ -0.32
Nubp2Q9R061 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nubp2Q9R061 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC13.06□□□□□ -0.32
Nubp2Q9R061 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.06□□□□□ -0.32
Nubp2Q9R061 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Nubp2Q9R061 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.06□□□□□ -0.32
Nubp2Q9R061 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nubp2Q9R061 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 9130204K15Rik-201ENSMUST00000131441 867 ntTSL 5 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.05□□□□□ -0.32
Nubp2Q9R061 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.05□□□□□ -0.32
Nubp2Q9R061 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Cmtm1-202ENSMUST00000160596 1900 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nubp2Q9R061 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp2Q9R061 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp2Q9R061 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp2Q9R061 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp2Q9R061 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp2Q9R061 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.04□□□□□ -0.32
Nubp2Q9R061 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp2Q9R061 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC13.04□□□□□ -0.32
Nubp2Q9R061 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp2Q9R061 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nubp2Q9R061 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms