Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 Gm44397-201ENSMUST00000195950 113 ntBASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col4a4Q9QZR9 Gm45351-201ENSMUST00000210683 2545 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Cdk3-ps-202ENSMUST00000174177 915 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Gm38223-201ENSMUST00000194484 695 ntBASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Gm10156-201ENSMUST00000122364 462 ntBASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Gm5850-201ENSMUST00000192923 1206 ntBASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Scoc-203ENSMUST00000212031 409 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col4a4Q9QZR9 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Kdm1a-202ENSMUST00000105847 3028 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Gm15371-201ENSMUST00000117057 784 ntBASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Gm1335-201ENSMUST00000121653 386 ntBASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Gm12749-201ENSMUST00000122138 1159 ntBASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Gm17111-201ENSMUST00000169981 411 ntTSL 3 BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Gm2383-201ENSMUST00000181461 807 ntBASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Gm29608-201ENSMUST00000190444 463 ntBASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Col4a4Q9QZR9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Ablim2-202ENSMUST00000101280 3042 ntTSL 5 BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Gm11658-201ENSMUST00000120913 1008 ntBASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Gm2467-201ENSMUST00000182266 1010 ntBASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Gm6981-201ENSMUST00000182467 1008 ntBASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.37□□□□□ -0.11
Col4a4Q9QZR9 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms