Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Gm9682-201ENSMUST00000197505 556 ntBASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
Chaf1aQ9QWF0 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Chaf1aQ9QWF0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Gm37153-201ENSMUST00000193637 231 ntBASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Gm6376-201ENSMUST00000209407 580 ntBASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Chaf1aQ9QWF0 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Chaf1aQ9QWF0 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Chaf1aQ9QWF0 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Chaf1aQ9QWF0 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Pcgf5-211ENSMUST00000225920 6443 ntBASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Cpeb3-208ENSMUST00000132580 3148 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Gm12134-201ENSMUST00000122109 520 ntBASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Gm18489-201ENSMUST00000172565 551 ntBASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Chaf1aQ9QWF0 Gm21009-201ENSMUST00000197169 1669 ntBASIC16.45■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms