Protein–RNA interactions for Protein: Q9JKS4

Ldb3, LIM domain-binding protein 3, mousemouse

Known RBP Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3Q9JKS4 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Gm27920-201ENSMUST00000183953 96 ntBASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Gm27494-201ENSMUST00000184735 189 ntBASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Gm5628-201ENSMUST00000222318 1049 ntBASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Ldb3Q9JKS4 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Gm14822-201ENSMUST00000122247 291 ntBASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Gm5479-201ENSMUST00000160578 435 ntBASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Ldb3Q9JKS4 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Gm24513-201ENSMUST00000174964 138 ntBASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Gm27397-201ENSMUST00000184997 107 ntBASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Gm18057-201ENSMUST00000208220 503 ntBASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Snx19-201ENSMUST00000164099 5762 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Ldb3Q9JKS4 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Agpat1-208ENSMUST00000174595 1911 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Ldb3Q9JKS4 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms