Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Ube4bQ9ES00 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Ube4bQ9ES00 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Ube4bQ9ES00 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Gm6623-201ENSMUST00000173570 544 ntBASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Mettl7a2-202ENSMUST00000176287 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Mettl7a2-201ENSMUST00000088142 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Ube4bQ9ES00 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.12□□□□□ -0.15
Ube4bQ9ES00 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms