Protein–RNA interactions for Protein: Q9EQH3

Vps35, Vacuolar protein sorting-associated protein 35, mousemouse

Known RBP Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps35Q9EQH3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Amz2-202ENSMUST00000092500 2816 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.72□□□□□ -0.05
Vps35Q9EQH3 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Gm16026-204ENSMUST00000162652 683 ntBASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Gm37935-201ENSMUST00000192012 982 ntBASIC14.71□□□□□ -0.05
Vps35Q9EQH3 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 AC225888.1-201ENSMUST00000227184 728 ntBASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps35Q9EQH3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps35Q9EQH3 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps35Q9EQH3 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps35Q9EQH3 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps35Q9EQH3 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps35Q9EQH3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Gm9385-201ENSMUST00000117563 472 ntBASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Gm45612-201ENSMUST00000211320 160 ntBASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps35Q9EQH3 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Gm6226-201ENSMUST00000117765 1146 ntBASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.69□□□□□ -0.06
Vps35Q9EQH3 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms