Protein–RNA interactions for Protein: Q9DCR2

Ap3s1, AP-3 complex subunit sigma-1, mousemouse

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ap3s1Q9DCR2 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Ap3s1Q9DCR2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ap3s1Q9DCR2 Trmu-201ENSMUST00000023019 1526 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Ap3s1Q9DCR2 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.08□□□□□ -0.31
Ap3s1Q9DCR2 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Gm43767-201ENSMUST00000198933 381 ntBASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Matn2-206ENSMUST00000228570 2798 ntBASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ap3s1Q9DCR2 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 2610206C17Rik-201ENSMUST00000129059 1717 ntTSL 2 BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ap3s1Q9DCR2 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Gm20760-201ENSMUST00000179197 648 ntBASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Gm8318-201ENSMUST00000182954 872 ntBASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Krtap5-1-202ENSMUST00000188274 742 ntBASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Fgfr1-201ENSMUST00000084027 5025 ntAPPRIS P3 TSL 5 BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ap3s1Q9DCR2 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms