Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Snx17-201ENSMUST00000031029 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Gm4875-201ENSMUST00000118257 786 ntBASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Gm13464-201ENSMUST00000119418 935 ntBASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Gm18187-201ENSMUST00000196476 984 ntBASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Gm16476-201ENSMUST00000221544 139 ntBASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Dupd1-202ENSMUST00000224735 548 ntBASIC14.36□□□□□ -0.11
Rrp8Q9DB85 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Gm5357-201ENSMUST00000212720 1924 ntBASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC14.36□□□□□ -0.11
Rrp8Q9DB85 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Tcp1-209ENSMUST00000151287 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 H2afy2-201ENSMUST00000020283 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Fads3-201ENSMUST00000115995 3269 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Ighv5-13-201ENSMUST00000193550 290 ntBASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Gm6745-201ENSMUST00000199216 526 ntBASIC14.35□□□□□ -0.11
Rrp8Q9DB85 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Rrp8Q9DB85 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Gm27631-201ENSMUST00000184163 466 ntBASIC14.34□□□□□ -0.11
Rrp8Q9DB85 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Gm8515-201ENSMUST00000194852 576 ntBASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Gm6263-201ENSMUST00000120029 1342 ntBASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Rrp8Q9DB85 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rrp8Q9DB85 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.33□□□□□ -0.11
Rrp8Q9DB85 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Rrp8Q9DB85 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Rrp8Q9DB85 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp8Q9DB85 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp8Q9DB85 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp8Q9DB85 Gna15-201ENSMUST00000043709 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp8Q9DB85 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Rrp8Q9DB85 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms