Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Gm27389-201ENSMUST00000183622 195 ntBASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 AC159205.6-201ENSMUST00000224935 887 ntBASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Tstd3-201ENSMUST00000029915 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Upk3bl1Q9D701 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 AL672049.1-201ENSMUST00000197943 91 ntBASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Gm21559-201ENSMUST00000220638 855 ntBASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Gm8587-201ENSMUST00000076538 843 ntBASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Upk3bl1Q9D701 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Gm11355-201ENSMUST00000121120 306 ntBASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Gm20865-201ENSMUST00000179095 856 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 AC126250.1-201ENSMUST00000228343 1768 ntBASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Upk3bl1Q9D701 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms