Protein–RNA interactions for Protein: Q9D548

Zcchc13, Cellular nucleic acid binding protein 2, mousemouse

Predictions only

Length 170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc13Q9D548 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Zcchc13Q9D548 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC9.34□□□□□ -0.91
Zcchc13Q9D548 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC9.34□□□□□ -0.91
Zcchc13Q9D548 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC9.34□□□□□ -0.91
Zcchc13Q9D548 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC9.34□□□□□ -0.91
Zcchc13Q9D548 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Gm42632-201ENSMUST00000201707 2411 ntBASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Gm15427-201ENSMUST00000117288 531 ntBASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Gm15467-201ENSMUST00000120582 445 ntBASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Gm4691-201ENSMUST00000182339 1000 ntBASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Gm17968-201ENSMUST00000194902 784 ntBASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Gm2451-201ENSMUST00000199447 999 ntBASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Gm10290-201ENSMUST00000200451 999 ntBASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Gm6443-201ENSMUST00000203599 874 ntBASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.33□□□□□ -0.92
Zcchc13Q9D548 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Gm12134-201ENSMUST00000122109 520 ntBASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Gm17271-201ENSMUST00000165535 355 ntBASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Gm44492-201ENSMUST00000197012 141 ntBASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Gm9182-201ENSMUST00000217829 639 ntBASIC9.32□□□□□ -0.92
Zcchc13Q9D548 AC090659.1-201ENSMUST00000224334 768 ntBASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Zcchc13Q9D548 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC9.32□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms