Protein–RNA interactions for Protein: Q9D3E6

Stag1, Cohesin subunit SA-1, mousemouse

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stag1Q9D3E6 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Stag1Q9D3E6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Gm27838-201ENSMUST00000184829 128 ntBASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Syt7-204ENSMUST00000223586 1344 ntBASIC17.47■□□□□ 0.39
Stag1Q9D3E6 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Gm21009-201ENSMUST00000197169 1669 ntBASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Mir1897-201ENSMUST00000122581 272 ntBASIC17.46■□□□□ 0.39
Stag1Q9D3E6 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Gm16215-201ENSMUST00000161990 637 ntBASIC17.46■□□□□ 0.39
Stag1Q9D3E6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Gm45785-201ENSMUST00000209690 988 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Gm5320-201ENSMUST00000207163 1519 ntBASIC17.46■□□□□ 0.39
Stag1Q9D3E6 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC17.46■□□□□ 0.38
Stag1Q9D3E6 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Stag1Q9D3E6 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Stag1Q9D3E6 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Stag1Q9D3E6 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Gm5745-201ENSMUST00000183748 313 ntBASIC17.44■□□□□ 0.38
Stag1Q9D3E6 Gm27631-201ENSMUST00000184163 466 ntBASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms