Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Ss18l1-201ENSMUST00000041126 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Khdc3Q9CWU5 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Khdc3Q9CWU5 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Khdc3Q9CWU5 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Khdc3Q9CWU5 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Khdc3Q9CWU5 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Khdc3Q9CWU5 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.08□□□□□ -0.16
Khdc3Q9CWU5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Khdc3Q9CWU5 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms