Protein–RNA interactions for Protein: Q9CW03

Smc3, Structural maintenance of chromosomes protein 3, mousemouse

Known RBP Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc3Q9CW03 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Smc3Q9CW03 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Smc3Q9CW03 AC119177.1-201ENSMUST00000227647 1332 ntBASIC17.29■□□□□ 0.36
Smc3Q9CW03 Trav13-3-201ENSMUST00000117226 336 ntBASIC17.29■□□□□ 0.36
Smc3Q9CW03 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
Smc3Q9CW03 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC17.29■□□□□ 0.36
Smc3Q9CW03 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.28■□□□□ 0.36
Smc3Q9CW03 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Gm7153-201ENSMUST00000117092 455 ntBASIC17.28■□□□□ 0.36
Smc3Q9CW03 Gm11452-201ENSMUST00000122376 690 ntBASIC17.28■□□□□ 0.36
Smc3Q9CW03 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC17.28■□□□□ 0.36
Smc3Q9CW03 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 AC025913.2-201ENSMUST00000220136 1766 ntBASIC17.28■□□□□ 0.36
Smc3Q9CW03 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Smc3Q9CW03 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Gm15593-201ENSMUST00000122085 1008 ntBASIC17.27■□□□□ 0.36
Smc3Q9CW03 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC17.27■□□□□ 0.36
Smc3Q9CW03 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.27■□□□□ 0.36
Smc3Q9CW03 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Smc3Q9CW03 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC17.27■□□□□ 0.35
Smc3Q9CW03 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.27■□□□□ 0.35
Smc3Q9CW03 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
Smc3Q9CW03 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.35
Smc3Q9CW03 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Smc3Q9CW03 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Smc3Q9CW03 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc3Q9CW03 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc3Q9CW03 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC17.26■□□□□ 0.35
Smc3Q9CW03 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc3Q9CW03 Sacs-201ENSMUST00000089394 3345 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Smc3Q9CW03 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC17.26■□□□□ 0.35
Smc3Q9CW03 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms