Protein–RNA interactions for Protein: Q9CUN6

Smurf1, E3 ubiquitin-protein ligase SMURF1, mousemouse

Predictions only

Length 731 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smurf1Q9CUN6 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smurf1Q9CUN6 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smurf1Q9CUN6 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smurf1Q9CUN6 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smurf1Q9CUN6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC13.39□□□□□ -0.27
Smurf1Q9CUN6 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smurf1Q9CUN6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smurf1Q9CUN6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smurf1Q9CUN6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smurf1Q9CUN6 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Smurf1Q9CUN6 Slc35c2-203ENSMUST00000109299 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smurf1Q9CUN6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smurf1Q9CUN6 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Smurf1Q9CUN6 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Gm7286-201ENSMUST00000182691 1007 ntBASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
Smurf1Q9CUN6 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Map2k3-201ENSMUST00000019076 2198 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Grk6-207ENSMUST00000225925 2769 ntBASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Mir3081-201ENSMUST00000175305 84 ntBASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Gm8349-201ENSMUST00000182720 1003 ntBASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Gm29246-201ENSMUST00000189221 349 ntTSL 3 BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Smurf1Q9CUN6 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Gm4609-201ENSMUST00000106443 1002 ntBASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Gm5138-201ENSMUST00000113842 1002 ntBASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Gm15191-201ENSMUST00000117933 1000 ntBASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Gm12182-201ENSMUST00000118655 1008 ntBASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Gm13882-201ENSMUST00000120886 1002 ntBASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Gm10284-201ENSMUST00000145057 1005 ntBASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Gm10481-201ENSMUST00000179228 1002 ntBASIC13.36□□□□□ -0.27
Smurf1Q9CUN6 Gapdh-ps15-201ENSMUST00000180966 1002 ntBASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms