Protein–RNA interactions for Protein: Q9CSV6

Sft2d3, Vesicle transport protein SFT2C, mousemouse

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d3Q9CSV6 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Pdlim1-201ENSMUST00000068439 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Gm44492-201ENSMUST00000197012 141 ntBASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 AC151286.1-201ENSMUST00000198489 145 ntBASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Sft2d3Q9CSV6 Gm29361-201ENSMUST00000183323 2000 ntBASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Ubp1-206ENSMUST00000216558 1623 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Gtdc1-202ENSMUST00000100127 2422 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Gm13597-201ENSMUST00000121239 375 ntBASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Gm26308-201ENSMUST00000157768 69 ntBASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Sphk1-204ENSMUST00000106386 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Sft2d3Q9CSV6 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Exo5-204ENSMUST00000177880 1969 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Exo5-201ENSMUST00000030375 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Nt5e-201ENSMUST00000034992 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Sft2d3Q9CSV6 Gm27301-201ENSMUST00000184012 127 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms