Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Myh2-203ENSMUST00000170159 6083 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Gm37722-201ENSMUST00000193757 208 ntBASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
RTRAFQ9CQE8 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RTRAFQ9CQE8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RTRAFQ9CQE8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RTRAFQ9CQE8 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
RTRAFQ9CQE8 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RTRAFQ9CQE8 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
RTRAFQ9CQE8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RTRAFQ9CQE8 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC11.96□□□□□ -0.5
RTRAFQ9CQE8 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RTRAFQ9CQE8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
RTRAFQ9CQE8 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Gm19863-201ENSMUST00000192480 2218 ntBASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 AC122901.1-201ENSMUST00000214203 1790 ntBASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Kcnq3-201ENSMUST00000070256 11824 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Rps15-ps2-201ENSMUST00000121788 438 ntBASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Gm9987-201ENSMUST00000069768 567 ntBASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Ntrk2-208ENSMUST00000225583 2719 ntBASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Zfp516-202ENSMUST00000171238 7725 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Zfp516-201ENSMUST00000071233 7703 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Ankra2-208ENSMUST00000226100 1476 ntBASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
RTRAFQ9CQE8 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Mapt-204ENSMUST00000106992 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Gm43570-201ENSMUST00000199951 3688 ntBASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Ticrr-201ENSMUST00000035977 7199 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
RTRAFQ9CQE8 Cramp1l-201ENSMUST00000073337 7517 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms