Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Trim3-201ENSMUST00000057525 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Mir124-2hg-202ENSMUST00000186746 1368 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Chchd1Q9CQA6 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.63
Chchd1Q9CQA6 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.63
Chchd1Q9CQA6 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.63
Chchd1Q9CQA6 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Pola2-201ENSMUST00000025752 2424 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 AC160980.1-201ENSMUST00000224136 970 ntBASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Celf4-206ENSMUST00000224553 1729 ntBASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Chchd1Q9CQA6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Gm11336-201ENSMUST00000118168 334 ntBASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Gm13148-201ENSMUST00000118892 745 ntBASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
Chchd1Q9CQA6 Gm2011-201ENSMUST00000203124 1263 ntBASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms