Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Krt88Q9CPR6 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Gm10499-201ENSMUST00000174094 934 ntBASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Krt88Q9CPR6 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC13.27□□□□□ -0.28
Krt88Q9CPR6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC13.27□□□□□ -0.28
Krt88Q9CPR6 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Krt88Q9CPR6 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Krt88Q9CPR6 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Krt88Q9CPR6 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Gm21362-201ENSMUST00000194272 928 ntBASIC13.27□□□□□ -0.29
Krt88Q9CPR6 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC13.27□□□□□ -0.29
Krt88Q9CPR6 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Krt88Q9CPR6 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Gm13962-201ENSMUST00000131512 611 ntTSL 5 BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Gm7506-201ENSMUST00000207758 815 ntBASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 AC171004.1-201ENSMUST00000221723 664 ntTSL 3 BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Krt88Q9CPR6 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms