Protein–RNA interactions for Protein: Q99PP6

Trim34a, Tripartite motif-containing protein 34A, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim34aQ99PP6 Nfix-203ENSMUST00000109762 2261 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Trim34aQ99PP6 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Fbln1-202ENSMUST00000109432 2273 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Mir125a-201ENSMUST00000083545 68 ntBASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Trim34aQ99PP6 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Gm9522-201ENSMUST00000182394 926 ntBASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Gm7390-201ENSMUST00000212452 1216 ntBASIC18.04■□□□□ 0.48
Trim34aQ99PP6 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.04■□□□□ 0.48
Trim34aQ99PP6 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC18.04■□□□□ 0.48
Trim34aQ99PP6 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Gm22189-201ENSMUST00000103822 86 ntBASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC18.03■□□□□ 0.48
Trim34aQ99PP6 AA619741-201ENSMUST00000195095 646 ntBASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 AC121804.3-201ENSMUST00000223420 295 ntBASIC18.03■□□□□ 0.48
Trim34aQ99PP6 AC154239.3-201ENSMUST00000226933 674 ntBASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Gm5357-201ENSMUST00000212720 1924 ntBASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Gm45751-201ENSMUST00000210185 1573 ntBASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
Trim34aQ99PP6 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Hnrnpr-202ENSMUST00000105850 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim34aQ99PP6 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Gm42612-201ENSMUST00000197986 623 ntBASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Gm43170-201ENSMUST00000199827 612 ntBASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Gm44616-201ENSMUST00000206417 1732 ntBASIC18.02■□□□□ 0.48
Trim34aQ99PP6 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms