Protein–RNA interactions for Protein: Q99PE5

Smim3, Small integral membrane protein 3, mousemouse

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim3Q99PE5 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Smim3Q99PE5 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Gm19164-201ENSMUST00000210667 640 ntBASIC12.53□□□□□ -0.4
Smim3Q99PE5 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim3Q99PE5 AC130713.1-201ENSMUST00000228853 1096 ntBASIC12.53□□□□□ -0.4
Smim3Q99PE5 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Smim3Q99PE5 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim3Q99PE5 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim3Q99PE5 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim3Q99PE5 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim3Q99PE5 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Smim3Q99PE5 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim3Q99PE5 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim3Q99PE5 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Smim3Q99PE5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim3Q99PE5 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Smim3Q99PE5 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Gm11860-201ENSMUST00000122346 1010 ntBASIC12.52□□□□□ -0.41
Smim3Q99PE5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC12.52□□□□□ -0.41
Smim3Q99PE5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Gm21559-201ENSMUST00000220638 855 ntBASIC12.52□□□□□ -0.41
Smim3Q99PE5 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 AC117588.1-201ENSMUST00000228510 999 ntBASIC12.52□□□□□ -0.41
Smim3Q99PE5 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Gm8587-201ENSMUST00000076538 843 ntBASIC12.52□□□□□ -0.41
Smim3Q99PE5 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC12.52□□□□□ -0.41
Smim3Q99PE5 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.52□□□□□ -0.41
Smim3Q99PE5 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Smim3Q99PE5 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Smim3Q99PE5 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.51□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms