Protein–RNA interactions for Protein: Q99LI7

Cstf3, Cleavage stimulation factor subunit 3, mousemouse

Known RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf3Q99LI7 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Cstf3Q99LI7 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Gm12008-201ENSMUST00000117791 755 ntBASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Mir5131-201ENSMUST00000175426 93 ntBASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Gm9449-201ENSMUST00000207265 1011 ntBASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Gm15590-201ENSMUST00000078419 552 ntBASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Cstf3Q99LI7 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Cstf3Q99LI7 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cstf3Q99LI7 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cstf3Q99LI7 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cstf3Q99LI7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cstf3Q99LI7 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Cstf3Q99LI7 Carlr-201ENSMUST00000181515 2574 ntBASIC14.21□□□□□ -0.14
Cstf3Q99LI7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Cstf3Q99LI7 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Cstf3Q99LI7 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Gm27628-201ENSMUST00000184911 107 ntBASIC14.2□□□□□ -0.14
Cstf3Q99LI7 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Trim3-205ENSMUST00000147044 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC14.2□□□□□ -0.14
Cstf3Q99LI7 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Gm10044-203ENSMUST00000166813 1471 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Trav13-3-201ENSMUST00000117226 336 ntBASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Gm23547-201ENSMUST00000158210 271 ntBASIC14.19□□□□□ -0.14
Cstf3Q99LI7 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.19□□□□□ -0.14
Cstf3Q99LI7 Gm27300-201ENSMUST00000184085 97 ntBASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 54.7 ms