Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Gm1401-201ENSMUST00000122048 772 ntBASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Gm21009-201ENSMUST00000197169 1669 ntBASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Pcdha8Q91Y12 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Gm13597-201ENSMUST00000121239 375 ntBASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Mir7036b-201ENSMUST00000184791 63 ntBASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Pcdha8Q91Y12 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Gm2272-201ENSMUST00000194903 582 ntBASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Gm44771-201ENSMUST00000206975 626 ntBASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdha8Q91Y12 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Dlgap1-211ENSMUST00000148486 5276 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdha8Q91Y12 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms