Protein–RNA interactions for Protein: Q91Y10

Pcdhac1, Protocadherin alpha C1, mousemouse

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1Q91Y10 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Pcgf5-211ENSMUST00000225920 6443 ntBASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Gm11185-201ENSMUST00000117732 1007 ntBASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Mir5126-201ENSMUST00000175513 77 ntBASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Gm37297-201ENSMUST00000192974 2384 ntBASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Carlr-201ENSMUST00000181515 2574 ntBASIC13.76□□□□□ -0.21
Pcdhac1Q91Y10 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Gm11453-201ENSMUST00000117318 1007 ntBASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Gm5682-201ENSMUST00000173402 505 ntBASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
Pcdhac1Q91Y10 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 N6amt1-202ENSMUST00000118115 1951 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Ccdc181-201ENSMUST00000027867 1909 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Pcdhac1Q91Y10 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhac1Q91Y10 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Pcdhac1Q91Y10 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms