Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhga3Q91XY5 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Terf1-201ENSMUST00000027057 1581 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 AC131709.1-201ENSMUST00000224731 1180 ntBASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Efs-202ENSMUST00000227037 2540 ntBASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Gm14780-201ENSMUST00000118387 2737 ntBASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Pcdhga3Q91XY5 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Tmem82-201ENSMUST00000053263 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Gm18246-201ENSMUST00000221023 728 ntBASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Pcdhga3Q91XY5 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Gm38391-201ENSMUST00000191720 4069 ntBASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Tnfsf13-202ENSMUST00000108648 1503 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Pcdhga3Q91XY5 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms