Protein–RNA interactions for Protein: Q91XW9

Pcdhgc5, MCG133388, isoform CRA_f, mousemouse

Predictions only

Length 944 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc5Q91XW9 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Pcdhgc5Q91XW9 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Arsi-201ENSMUST00000040359 2975 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Otol1-201ENSMUST00000053013 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Fam241b-204ENSMUST00000125704 1769 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Gm13337-201ENSMUST00000119183 1594 ntBASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Pcdhgc5Q91XW9 Gm45504-201ENSMUST00000211407 2107 ntBASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Gjb6-201ENSMUST00000039380 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 H1fnt-201ENSMUST00000060855 1326 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Gm6888-201ENSMUST00000221983 706 ntBASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Gm11839-201ENSMUST00000120647 1953 ntBASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 A230060F14Rik-202ENSMUST00000190739 1889 ntBASIC16.76■□□□□ 0.27
Pcdhgc5Q91XW9 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 AC160980.1-201ENSMUST00000224136 970 ntBASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhgc5Q91XW9 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Chtf18-201ENSMUST00000048054 3214 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Ccdc43-205ENSMUST00000164506 2316 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhgc5Q91XW9 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms