Protein–RNA interactions for Protein: Q91XB0

Trex1, Three-prime repair exonuclease 1, mousemouse

Predictions only

Length 314 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trex1Q91XB0 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trex1Q91XB0 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
Trex1Q91XB0 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Gm12859-201ENSMUST00000117834 427 ntBASIC16.78■□□□□ 0.28
Trex1Q91XB0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.78■□□□□ 0.28
Trex1Q91XB0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Mir125a-201ENSMUST00000083545 68 ntBASIC16.78■□□□□ 0.28
Trex1Q91XB0 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Syt6-201ENSMUST00000090697 4416 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trex1Q91XB0 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trex1Q91XB0 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trex1Q91XB0 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trex1Q91XB0 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trex1Q91XB0 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trex1Q91XB0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trex1Q91XB0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC16.77■□□□□ 0.28
Trex1Q91XB0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trex1Q91XB0 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC16.77■□□□□ 0.28
Trex1Q91XB0 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC16.77■□□□□ 0.28
Trex1Q91XB0 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trex1Q91XB0 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC16.77■□□□□ 0.28
Trex1Q91XB0 AL593843.1-201ENSMUST00000195891 145 ntBASIC16.77■□□□□ 0.28
Trex1Q91XB0 Gm20445-201ENSMUST00000061905 565 ntBASIC16.77■□□□□ 0.28
Trex1Q91XB0 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trex1Q91XB0 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trex1Q91XB0 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trex1Q91XB0 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trex1Q91XB0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trex1Q91XB0 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trex1Q91XB0 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trex1Q91XB0 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trex1Q91XB0 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.27
Trex1Q91XB0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trex1Q91XB0 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC16.76■□□□□ 0.27
Trex1Q91XB0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Gm9229-201ENSMUST00000222777 126 ntBASIC16.76■□□□□ 0.27
Trex1Q91XB0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Gm45751-201ENSMUST00000210185 1573 ntBASIC16.76■□□□□ 0.27
Trex1Q91XB0 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trex1Q91XB0 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 52.6 ms