Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Gm43125-201ENSMUST00000201724 730 ntBASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Gm18057-201ENSMUST00000208220 503 ntBASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Ddx41Q91VN6 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 AC140397.2-201ENSMUST00000224213 834 ntBASIC16.86■□□□□ 0.29
Ddx41Q91VN6 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Gm37297-201ENSMUST00000192974 2384 ntBASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Ddx41Q91VN6 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 AC159114.1-201ENSMUST00000220349 266 ntBASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 CT025626.1-201ENSMUST00000223735 1455 ntBASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Ddx41Q91VN6 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 AC158982.1-201ENSMUST00000228377 901 ntBASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ddx41Q91VN6 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms