Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.52□□□□□ -0.08
Vsx1Q91V10 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vsx1Q91V10 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vsx1Q91V10 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vsx1Q91V10 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vsx1Q91V10 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vsx1Q91V10 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vsx1Q91V10 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.52□□□□□ -0.08
Vsx1Q91V10 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vsx1Q91V10 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Vsx1Q91V10 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Vsx1Q91V10 Gm24543-201ENSMUST00000103867 82 ntBASIC14.52□□□□□ -0.09
Vsx1Q91V10 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Gm4875-201ENSMUST00000118257 786 ntBASIC14.52□□□□□ -0.09
Vsx1Q91V10 Gm15653-201ENSMUST00000119247 907 ntBASIC14.52□□□□□ -0.09
Vsx1Q91V10 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Gm42612-201ENSMUST00000197986 623 ntBASIC14.52□□□□□ -0.09
Vsx1Q91V10 Gm43170-201ENSMUST00000199827 612 ntBASIC14.52□□□□□ -0.09
Vsx1Q91V10 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Fkbp2-201ENSMUST00000070878 642 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Tfap2a-203ENSMUST00000223869 2037 ntBASIC14.52□□□□□ -0.09
Vsx1Q91V10 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Slc33a1-203ENSMUST00000161659 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Ube2d2b-201ENSMUST00000072578 1678 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Vsx1Q91V10 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.51□□□□□ -0.09
Vsx1Q91V10 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Gm9115-201ENSMUST00000120192 1348 ntBASIC14.51□□□□□ -0.09
Vsx1Q91V10 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC14.51□□□□□ -0.09
Vsx1Q91V10 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.51□□□□□ -0.09
Vsx1Q91V10 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Gm6266-201ENSMUST00000203844 806 ntBASIC14.51□□□□□ -0.09
Vsx1Q91V10 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.51□□□□□ -0.09
Vsx1Q91V10 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Vsx1Q91V10 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Vsx1Q91V10 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Vsx1Q91V10 BC037039-201ENSMUST00000192003 2205 ntBASIC14.5□□□□□ -0.09
Vsx1Q91V10 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Gm22189-201ENSMUST00000103822 86 ntBASIC14.5□□□□□ -0.09
Vsx1Q91V10 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Gm9719-201ENSMUST00000162765 543 ntBASIC14.5□□□□□ -0.09
Vsx1Q91V10 CT010506.4-201ENSMUST00000225457 351 ntBASIC14.5□□□□□ -0.09
Vsx1Q91V10 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Fam69c-201ENSMUST00000052501 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Vsx1Q91V10 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Cnot10-206ENSMUST00000216785 1723 ntTSL 5 BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Fam133b-205ENSMUST00000197082 1943 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Vsx1Q91V10 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms