Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Gm12008-201ENSMUST00000117791 755 ntBASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Gm12350-201ENSMUST00000121208 462 ntBASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC12.32□□□□□ -0.44
H1fooQ8VIK3 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Gm15593-201ENSMUST00000122085 1008 ntBASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
H1fooQ8VIK3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Lsp1-203ENSMUST00000105966 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
H1fooQ8VIK3 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 AC084391.1-201ENSMUST00000200651 141 ntBASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Mzt1-203ENSMUST00000227948 952 ntBASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
H1fooQ8VIK3 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms