Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Gm14719-201ENSMUST00000121891 340 ntBASIC15.61■□□□□ 0.09
TraipQ8VIG6 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.61■□□□□ 0.09
TraipQ8VIG6 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Gm27838-201ENSMUST00000184829 128 ntBASIC15.61■□□□□ 0.09
TraipQ8VIG6 Dupd1-202ENSMUST00000224735 548 ntBASIC15.61■□□□□ 0.09
TraipQ8VIG6 AC156016.3-201ENSMUST00000228623 344 ntBASIC15.61■□□□□ 0.09
TraipQ8VIG6 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
TraipQ8VIG6 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.6■□□□□ 0.09
TraipQ8VIG6 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
TraipQ8VIG6 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Gm5320-201ENSMUST00000207163 1519 ntBASIC15.59■□□□□ 0.09
TraipQ8VIG6 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.59■□□□□ 0.09
TraipQ8VIG6 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC15.59■□□□□ 0.09
TraipQ8VIG6 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC15.59■□□□□ 0.09
TraipQ8VIG6 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC15.59■□□□□ 0.09
TraipQ8VIG6 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Gm13127-201ENSMUST00000118978 1389 ntBASIC15.59■□□□□ 0.09
TraipQ8VIG6 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
TraipQ8VIG6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TraipQ8VIG6 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
TraipQ8VIG6 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
TraipQ8VIG6 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.58■□□□□ 0.09
TraipQ8VIG6 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TraipQ8VIG6 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
TraipQ8VIG6 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC15.58■□□□□ 0.09
TraipQ8VIG6 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
TraipQ8VIG6 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms