Protein–RNA interactions for Protein: Q8VEJ9

Vps4a, Vacuolar protein sorting-associated protein 4A, mousemouse

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4aQ8VEJ9 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Tssc4-201ENSMUST00000060433 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Vps4aQ8VEJ9 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Gm7901-201ENSMUST00000120430 1597 ntBASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Gm5253-201ENSMUST00000187104 1025 ntBASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Samd14-201ENSMUST00000055947 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Gm15500-202ENSMUST00000071641 1019 ntBASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Vps4aQ8VEJ9 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4aQ8VEJ9 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4aQ8VEJ9 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4aQ8VEJ9 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4aQ8VEJ9 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4aQ8VEJ9 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4aQ8VEJ9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4aQ8VEJ9 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4aQ8VEJ9 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4aQ8VEJ9 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4aQ8VEJ9 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4aQ8VEJ9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Vps4aQ8VEJ9 Gm27646-201ENSMUST00000183989 110 ntBASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Vps4aQ8VEJ9 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Lypd1-205ENSMUST00000162899 1511 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 AC110091.2-202ENSMUST00000216718 1148 ntTSL 5 BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Vps4aQ8VEJ9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms