Protein–RNA interactions for Protein: Q8VE91

Retreg1d, Reticulophagy regulator 1, mousemouse

Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg1dQ8VE91 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retreg1dQ8VE91 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retreg1dQ8VE91 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Retreg1dQ8VE91 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retreg1dQ8VE91 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retreg1dQ8VE91 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retreg1dQ8VE91 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retreg1dQ8VE91 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retreg1dQ8VE91 Dnm1l-203ENSMUST00000115749 4068 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retreg1dQ8VE91 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Retreg1dQ8VE91 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retreg1dQ8VE91 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retreg1dQ8VE91 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Mdp1-201ENSMUST00000002400 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Gm8396-201ENSMUST00000057361 823 ntBASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.59□□□□□ -0.07
Retreg1dQ8VE91 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retreg1dQ8VE91 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retreg1dQ8VE91 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retreg1dQ8VE91 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Retreg1dQ8VE91 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
Retreg1dQ8VE91 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Retreg1dQ8VE91 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Retreg1dQ8VE91 AC126250.1-201ENSMUST00000228343 1768 ntBASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Mocos-201ENSMUST00000068006 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Rprl2-201ENSMUST00000157150 290 ntBASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
Retreg1dQ8VE91 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg1dQ8VE91 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg1dQ8VE91 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Retreg1dQ8VE91 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg1dQ8VE91 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg1dQ8VE91 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Retreg1dQ8VE91 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg1dQ8VE91 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg1dQ8VE91 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retreg1dQ8VE91 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms