Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rpap2Q8VC34 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Gm12620-201ENSMUST00000119791 1986 ntBASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Gm12612-201ENSMUST00000140182 1986 ntBASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Gm11594-201ENSMUST00000122313 162 ntBASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Gm12017-201ENSMUST00000122453 1003 ntBASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Klk2-ps-201ENSMUST00000205342 571 ntBASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Gm5628-201ENSMUST00000222318 1049 ntBASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC16.11■□□□□ 0.17
Rpap2Q8VC34 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Gm38554-201ENSMUST00000201639 708 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 AC155252.2-201ENSMUST00000226946 680 ntBASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Rpap2Q8VC34 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Gm18737-201ENSMUST00000173594 937 ntBASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Gm27494-201ENSMUST00000184735 189 ntBASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Msantd1-204ENSMUST00000212362 798 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 AC225888.1-201ENSMUST00000227184 728 ntBASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Zmym3-201ENSMUST00000063577 6057 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Rpap2Q8VC34 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms