Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Vps39Q8R5L3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC14.72□□□□□ -0.05
Vps39Q8R5L3 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Gm23547-201ENSMUST00000158210 271 ntBASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Gm15590-201ENSMUST00000078419 552 ntBASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Cchcr1-201ENSMUST00000045956 2748 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Vps39Q8R5L3 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Zfp446-204ENSMUST00000108537 2178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Vps39Q8R5L3 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps39Q8R5L3 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.71□□□□□ -0.06
Vps39Q8R5L3 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Vps39Q8R5L3 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.71□□□□□ -0.06
Vps39Q8R5L3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Mir5131-201ENSMUST00000175426 93 ntBASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Mir5126-201ENSMUST00000175513 77 ntBASIC14.7□□□□□ -0.06
Vps39Q8R5L3 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms