Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Fgfr1op2-203ENSMUST00000067404 2766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Atp2a1Q8R429 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Gm5479-201ENSMUST00000160578 435 ntBASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Ighv8-7-201ENSMUST00000194349 297 ntBASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Gm10313-201ENSMUST00000095320 1002 ntBASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Phospho2-201ENSMUST00000028494 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Atp2a1Q8R429 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
Atp2a1Q8R429 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Vwa8-202ENSMUST00000227255 3406 ntAPPRIS ALT2 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Gm17837-201ENSMUST00000186435 985 ntBASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Atp2a1Q8R429 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC16.38■□□□□ 0.21
Atp2a1Q8R429 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms