Protein–RNA interactions for Protein: Q8R3P9

Slf1, SMC5-SMC6 complex localization factor protein 1, mousemouse

Predictions only

Length 1,054 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slf1Q8R3P9 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
Slf1Q8R3P9 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
Slf1Q8R3P9 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.89□□□□□ -0.03
Slf1Q8R3P9 AC127349.1-201ENSMUST00000224590 266 ntBASIC14.89□□□□□ -0.03
Slf1Q8R3P9 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slf1Q8R3P9 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.89□□□□□ -0.03
Slf1Q8R3P9 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
Slf1Q8R3P9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slf1Q8R3P9 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slf1Q8R3P9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slf1Q8R3P9 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slf1Q8R3P9 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slf1Q8R3P9 Cmc2-205ENSMUST00000148235 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Slf1Q8R3P9 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Slf1Q8R3P9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Hist1h4k-201ENSMUST00000102983 312 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Slf1Q8R3P9 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Gm27357-201ENSMUST00000183754 135 ntBASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Rtn1-201ENSMUST00000021497 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Slf1Q8R3P9 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Slf1Q8R3P9 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms