Protein–RNA interactions for Protein: Q8R2Q0

Trim29, Tripartite motif-containing protein 29, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim29Q8R2Q0 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Map3k5-202ENSMUST00000120259 4289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Olfr533-202ENSMUST00000211093 2397 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC16.78■□□□□ 0.28
Trim29Q8R2Q0 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Gm37736-201ENSMUST00000193564 2802 ntBASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Gm12260-201ENSMUST00000122447 411 ntBASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Gm16026-204ENSMUST00000162652 683 ntBASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Gm27301-201ENSMUST00000184012 127 ntBASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 AC174742.1-201ENSMUST00000218272 304 ntBASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 AC154572.2-201ENSMUST00000225105 997 ntBASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.28
Trim29Q8R2Q0 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
Trim29Q8R2Q0 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trim29Q8R2Q0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.27
Trim29Q8R2Q0 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim29Q8R2Q0 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim29Q8R2Q0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim29Q8R2Q0 AC131586.3-201ENSMUST00000228355 1367 ntBASIC16.77■□□□□ 0.27
Trim29Q8R2Q0 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Gm10605-202ENSMUST00000183019 3198 ntBASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim29Q8R2Q0 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Gm14026-201ENSMUST00000120625 1789 ntBASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Gm9726-201ENSMUST00000180321 678 ntBASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Mir8117-201ENSMUST00000184773 107 ntBASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim29Q8R2Q0 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms