Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Iqcj-201ENSMUST00000063263 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Rpp40Q8R1F9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Gm29541-201ENSMUST00000191351 678 ntBASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Gm18049-201ENSMUST00000208909 581 ntBASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Rpp40Q8R1F9 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Gm42466-201ENSMUST00000202099 1301 ntBASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Zkscan3-203ENSMUST00000116434 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Rpp40Q8R1F9 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Srsf11-204ENSMUST00000121326 3106 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Gm9182-201ENSMUST00000217829 639 ntBASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Rpp40Q8R1F9 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.1
Rpp40Q8R1F9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Rpp40Q8R1F9 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Gm7336-201ENSMUST00000107041 1232 ntBASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Rpp40Q8R1F9 Adnp-201ENSMUST00000057793 4917 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms